seqsero 1.0-1 in ubuntu - bionic / universe

About

This package is 347.6 KB. It is available at http://archive.ubuntu.com/ubuntu/pool/universe/s/seqsero/seqsero_1.0-1_all.deb .

View its full control file here: debian/control.

Description

Salmonella serotyping from genome sequencing data

Relations

This package does not recommend any other package.

This package suggests: ispcr.

This package does not conflict with any other package.

Package Contents

This package is indexed.

seqsero 1.0-1 is in ubuntu - bionic / universe. This package's architecture is: architectureless.

File Mime Type Owner Mode Size
postinst text/x-shellscript N/A N/A 175 bytes
prerm text/x-shellscript N/A N/A 251 bytes
/usr/ root:root 0o755
/usr/bin/ root:root 0o755
/usr/bin/seqsero root:root 0o777
/usr/bin/seqsero_batch_pair-end text/x-shellscript root:root 0o755 1.3 KB
/usr/share/ root:root 0o755
/usr/share/doc/ root:root 0o755
/usr/share/doc-base/ root:root 0o755
/usr/share/doc-base/seqsero text/plain root:root 0o644 385 bytes
/usr/share/doc/seqsero/ root:root 0o755
/usr/share/doc/seqsero/changelog.Debian.gz application/gzip root:root 0o644 153 bytes
/usr/share/doc/seqsero/copyright text/plain root:root 0o644 1.0 KB
/usr/share/doc/seqsero/README.Debian text/plain root:root 0o644 689 bytes
/usr/share/doc/seqsero/README.md text/plain root:root 0o644 1.6 KB
/usr/share/doc/seqsero/User_manual.pdf application/pdf root:root 0o644 114.2 KB
/usr/share/man/ root:root 0o755
/usr/share/man/man1/ root:root 0o755
/usr/share/man/man1/seqsero.1.gz application/gzip root:root 0o644 591 bytes
/usr/share/man/man1/seqsero_batch_pair-end.1.gz application/gzip root:root 0o644 424 bytes
/usr/share/python/ root:root 0o755
/usr/share/python/runtime.d/ root:root 0o755
/usr/share/python/runtime.d/seqsero.rtupdate text/x-shellscript root:root 0o755 131 bytes
/usr/share/seqsero/ root:root 0o755
/usr/share/seqsero/database/ root:root 0o755
/usr/share/seqsero/database/complete_oafA.fasta text/plain root:root 0o644 1.8 KB
/usr/share/seqsero/database/fliC_b_whole.fasta text/plain root:root 0o644 3.1 KB
/usr/share/seqsero/database/FliC_Family_b,d,j_special_genes.fasta text/plain root:root 0o644 30.0 KB
/usr/share/seqsero/database/FliC_Family_fg_special.fasta text/plain root:root 0o644 504 bytes
/usr/share/seqsero/database/FliC_Family_g_special_genes.fasta text/plain root:root 0o644 77.8 KB
/usr/share/seqsero/database/FliC_Family_k_z58_special_genes.fasta text/plain root:root 0o644 1.8 KB
/usr/share/seqsero/database/FliC_Family_k,z_special_genes.fasta text/plain root:root 0o644 10.9 KB
/usr/share/seqsero/database/FliC_Family_l,v_special_genes.fasta text/plain root:root 0o644 3.4 KB
/usr/share/seqsero/database/FliC_Family_r,i_special_genes_short.fasta text/plain root:root 0o644 11.1 KB
/usr/share/seqsero/database/FliC_Family_z36z38_special_genes.fasta text/plain root:root 0o644 3.9 KB
/usr/share/seqsero/database/FliC_Family_z44_k_special_genes.fasta text/plain root:root 0o644 3.5 KB
/usr/share/seqsero/database/FliC_Family_z4z23_special_genes.fasta text/plain root:root 0o644 21.6 KB
/usr/share/seqsero/database/FliC_f_g_s_whole.fasta text/plain root:root 0o644 10.8 KB
/usr/share/seqsero/database/fliC_k,z_whole.fasta text/plain root:root 0o644 3.0 KB
/usr/share/seqsero/database/fliC_l_z13_whole.fasta text/plain root:root 0o644 1.5 KB
/usr/share/seqsero/database/fliC_r_whole.fasta text/plain root:root 0o644 3.0 KB
/usr/share/seqsero/database/fliC_r_whole.fasta.amb text/plain root:root 0o644 9 bytes
/usr/share/seqsero/database/fliC_r_whole.fasta.ann text/plain root:root 0o644 144 bytes
/usr/share/seqsero/database/fliC_r_whole.fasta.bwt application/octet-stream root:root 0o644 3.0 KB
/usr/share/seqsero/database/fliC_r_whole.fasta.pac application/octet-stream root:root 0o644 744 bytes
/usr/share/seqsero/database/fliC_r_whole.fasta.sa application/octet-stream root:root 0o644 1.5 KB
/usr/share/seqsero/database/fliC_z36,z38_whole.fasta text/plain root:root 0o644 1.3 KB
/usr/share/seqsero/database/fliC_z4,z23_family.fasta text/plain root:root 0o644 59.1 KB
/usr/share/seqsero/database/fliC_z4z23_whole.fasta text/plain root:root 0o644 1.3 KB
/usr/share/seqsero/database/fliC_z58_k_special_sequences.fasta text/plain root:root 0o644 195 bytes
/usr/share/seqsero/database/FljB_1_2_7_whole.fasta text/plain root:root 0o644 9.2 KB
/usr/share/seqsero/database/FljB_1_2_7_whole.fasta.amb text/plain root:root 0o644 9 bytes
/usr/share/seqsero/database/FljB_1_2_7_whole.fasta.ann text/plain root:root 0o644 436 bytes
/usr/share/seqsero/database/FljB_1_2_7_whole.fasta.bwt application/octet-stream root:root 0o644 9.0 KB
/usr/share/seqsero/database/FljB_1_2_7_whole.fasta.pac application/octet-stream root:root 0o644 2.2 KB
/usr/share/seqsero/database/FljB_1_2_7_whole.fasta.sa application/octet-stream root:root 0o644 4.5 KB
/usr/share/seqsero/database/fljB_e,n,z15_whole.fasta text/plain root:root 0o644 1.5 KB
/usr/share/seqsero/database/FljB_Family_1_special_genes_all.fasta text/plain root:root 0o644 26.6 KB
/usr/share/seqsero/database/FljB_Family_e_special_genes.fasta text/plain root:root 0o644 6.1 KB
/usr/share/seqsero/database/FljB_Family_k,z_special_genes.fasta text/plain root:root 0o644 7.6 KB
/usr/share/seqsero/database/FljB_Family_l,v_special_genes.fasta text/plain root:root 0o644 1.0 KB
/usr/share/seqsero/database/FljB_Family_l,w_special_genes.fasta text/plain root:root 0o644 1.0 KB
/usr/share/seqsero/database/FljB_Family_z_special_genes.fasta text/plain root:root 0o644 7.6 KB
/usr/share/seqsero/database/FljB_l,z13,z28_whole.fasta text/plain root:root 0o644 3.0 KB
/usr/share/seqsero/database/FljB_z6_whole.fasta text/plain root:root 0o644 3.0 KB
/usr/share/seqsero/database/H_combine_update_9_03_2014_new.fasta text/plain root:root 0o644 998.9 KB
/usr/share/seqsero/database/H_newest_database.fasta text/plain root:root 0o644 598.6 KB
/usr/share/seqsero/database/H_new_fliC_protein_database.fasta text/plain root:root 0o644 249.3 KB
/usr/share/seqsero/database/H_new_fljB_protein_database.fasta text/plain root:root 0o644 101.4 KB
/usr/share/seqsero/database/new_Oserotype.fasta text/plain root:root 0o644 607.7 KB
/usr/share/seqsero/database/O_3,10_and_1,3,19_spe.fasta text/plain root:root 0o644 1.7 KB
/usr/share/seqsero/database/O_4_wzy_but_not_in_rfb.fasta text/plain root:root 0o644 1.4 KB
/usr/share/seqsero/database/oafA_of_O4_O5.fasta text/plain root:root 0o644 679 bytes
/usr/share/seqsero/database/ParaA_rfb.fasta text/plain root:root 0o644 26.9 KB
/usr/share/seqsero/database/ParaA_rfb.fasta.amb text/plain root:root 0o644 10 bytes
/usr/share/seqsero/database/ParaA_rfb.fasta.ann text/plain root:root 0o644 104 bytes
/usr/share/seqsero/database/ParaA_rfb.fasta.bwt application/octet-stream root:root 0o644 26.9 KB
/usr/share/seqsero/database/ParaA_rfb.fasta.pac application/octet-stream root:root 0o644 6.7 KB
/usr/share/seqsero/database/ParaA_rfb.fasta.sa application/octet-stream root:root 0o644 13.5 KB
/usr/share/seqsero/database/special_new_O_genes.fasta text/plain root:root 0o644 58.0 KB
/usr/share/seqsero/database/special_O_genes.fasta text/plain root:root 0o644 52.4 KB
/usr/share/seqsero/database/specific_genes.fasta text/plain root:root 0o644 5.0 KB
/usr/share/seqsero/database/Typhimurium_LT2_gnd_galF.fasta text/plain root:root 0o644 2.3 KB
/usr/share/seqsero/database/tyr_of_O2_O9.fasta text/plain root:root 0o644 1.5 KB
/usr/share/seqsero/libs/ root:root 0o755
/usr/share/seqsero/libs/BWA_analysis_H_update_new_family_dependent.py text/x-python root:root 0o644 18.9 KB
/usr/share/seqsero/libs/BWA_analysis_O_new_dependent.py text/x-python root:root 0o644 10.2 KB
/usr/share/seqsero/libs/compare_and_change_two_fastq_id.py text/x-python root:root 0o644 706 bytes
/usr/share/seqsero/libs/deletion_compare.py text/x-python root:root 0o644 4.5 KB
/usr/share/seqsero/libs/H_combination_output_analysis.py text/x-python root:root 0o644 10.5 KB
/usr/share/seqsero/libs/Initial_Conditions.py text/x-python root:root 0o644 97.5 KB
/usr/share/seqsero/libs/Initial_functions.py text/x-python root:root 0o644 1.1 KB
/usr/share/seqsero/libs/Otype_determine_analysis.py text/x-python root:root 0o644 33.3 KB
/usr/share/seqsero/libs/run_auto_All_for_assemblies.py text/x-python root:root 0o644 10.7 KB
/usr/share/seqsero/libs/run_auto_All_for_web_multi_revise.py text/x-python root:root 0o644 12.8 KB
/usr/share/seqsero/libs/special_gene_test_assemblies.py text/x-python root:root 0o644 2.1 KB
/usr/share/seqsero/libs/split_interleaved_fastq.pl text/x-perl root:root 0o755 4.5 KB
/usr/share/seqsero/libs/splitPairedEndReads.pl text/plain root:root 0o644 770 bytes
/usr/share/seqsero/primers/ root:root 0o755
/usr/share/seqsero/primers/seq_primer_fliC.txt text/plain root:root 0o644 67 bytes
/usr/share/seqsero/primers/seq_primer_fljB.txt text/plain root:root 0o644 270 bytes
/usr/share/seqsero/SeqSero.py text/plain root:root 0o755 2.8 KB

APT Browse - Built by Thomas Orozco.