About

This package is 281.7 KB. It is available at http://archive.ubuntu.com/ubuntu/pool/universe/s/samtools/samtools_1.7-1_amd64.deb .

View its full control file here: debian/control.

Description

processing sequence alignments in SAM and BAM formats

Relations

This package depends on: libc6 (>= 2.14), libhts2 (>= 1.7-1), libncurses5 (>= 6), libtinfo5 (>= 6), zlib1g (>= 1:1.1.4).

This package recommends: python, cwltool.

This package does not suggest any other package.

This package does not conflict with any other package.

Package Contents

This package is indexed.

samtools 1.7-1 is in ubuntu - bionic / universe. This package's architecture is: amd64.

File Mime Type Owner Mode Size
/usr/ root:root 0o755
/usr/bin/ root:root 0o755
/usr/bin/ace2sam application/x-sharedlib root:root 0o755 22.0 KB
/usr/bin/blast2sam.pl text/x-perl root:root 0o755 5.2 KB
/usr/bin/bowtie2sam.pl text/x-perl root:root 0o755 3.3 KB
/usr/bin/export2sam.pl text/x-perl root:root 0o755 17.6 KB
/usr/bin/interpolate_sam.pl text/x-perl root:root 0o755 6.0 KB
/usr/bin/maq2sam-long application/x-sharedlib root:root 0o755 10.0 KB
/usr/bin/maq2sam-short application/x-sharedlib root:root 0o755 10.0 KB
/usr/bin/md5fa application/x-sharedlib root:root 0o755 10.0 KB
/usr/bin/md5sum-lite application/x-sharedlib root:root 0o755 10.0 KB
/usr/bin/novo2sam.pl text/x-perl root:root 0o755 6.6 KB
/usr/bin/plot-bamstats text/x-perl root:root 0o755 47.5 KB
/usr/bin/psl2sam.pl text/x-perl root:root 0o755 3.1 KB
/usr/bin/sam2vcf.pl text/x-perl root:root 0o755 8.8 KB
/usr/bin/samtools application/x-sharedlib root:root 0o755 498.1 KB
/usr/bin/samtools.pl text/x-perl root:root 0o755 16.1 KB
/usr/bin/seq_cache_populate.pl text/x-perl root:root 0o755 10.8 KB
/usr/bin/soap2sam.pl text/x-perl root:root 0o755 3.8 KB
/usr/bin/varfilter.py text/x-python root:root 0o755 7.7 KB
/usr/bin/wgsim application/x-sharedlib root:root 0o755 22.0 KB
/usr/bin/wgsim_eval.pl text/x-perl root:root 0o755 12.2 KB
/usr/bin/zoom2sam.pl text/x-perl root:root 0o755 3.5 KB
/usr/share/ root:root 0o755
/usr/share/commonwl/ root:root 0o755
/usr/share/commonwl/samtools-faidx.cwl text/plain root:root 0o755 1.9 KB
/usr/share/commonwl/samtools-index.cwl text/plain root:root 0o755 1.9 KB
/usr/share/commonwl/samtools-rmdup.cwl text/plain root:root 0o755 1.6 KB
/usr/share/commonwl/samtools-sort.cwl text/plain root:root 0o755 2.8 KB
/usr/share/commonwl/samtools-view.cwl text/plain root:root 0o755 6.1 KB
/usr/share/doc/ root:root 0o755
/usr/share/doc/samtools/ root:root 0o755
/usr/share/doc/samtools/AUTHORS text/plain root:root 0o644 828 bytes
/usr/share/doc/samtools/changelog.Debian.gz application/gzip root:root 0o644 979 bytes
/usr/share/doc/samtools/copyright text/plain root:root 0o644 3.4 KB
/usr/share/doc/samtools/NEWS.Debian.gz application/gzip root:root 0o644 295 bytes
/usr/share/doc/samtools/README.Debian text/plain root:root 0o644 721 bytes
/usr/share/doc/samtools/reference text/plain root:root 0o644 592 bytes
/usr/share/lintian/ root:root 0o755
/usr/share/lintian/overrides/ root:root 0o755
/usr/share/lintian/overrides/samtools text/plain root:root 0o644 220 bytes
/usr/share/man/ root:root 0o755
/usr/share/man/man1/ root:root 0o755
/usr/share/man/man1/ace2sam.1.gz application/gzip root:root 0o644 462 bytes
/usr/share/man/man1/samtools.1.gz application/gzip root:root 0o644 21.5 KB
/usr/share/man/man1/samtools.pl.1.gz application/gzip root:root 0o644 410 bytes
/usr/share/man/man1/wgsim.1.gz application/gzip root:root 0o644 518 bytes