/usr/lib/python2.7/dist-packages/shapely/speedups/ is in python-shapely 1.3.0-1.
This file is owned by root:root, with mode 0o755.
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..
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/usr/lib/python2.7/dist-packages/shapely/speedups/__init__.py
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text/x-python | root:root | 0o644 | 1.3 KB |
/usr/lib/python2.7/dist-packages/shapely/speedups/_speedups.x86_64-linux-gnu.so
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application/x-sharedlib | root:root | 0o644 | 57.7 KB |