/usr/share/pyshared/Bio/Restriction/RanaConfig.py is in python-biopython 1.58-1.
This file is owned by root:root, with mode 0o644.
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# Restriction Analysis Libraries.
# Copyright (C) 2004. Frederic Sohm.
#
# This code is part of the Biopython distribution and governed by its
# license. Please see the LICENSE file that should have been included
# as part of this package.
#
import os
###############################################################################
# Configuration of the console.
#
# Mainly used by PrintFormat.PrintFormat
#
# ConsoleWidth : width of the console used default to 80.
# should never be less than 60.
# NameWidth : space attributed to the name in PrintList method.
# Indent : Indent of the second line.
# MaxSize : Maximal size of the sequence (default=6:
# -> 99 999 bp + 1 trailing ','
# people are unlikely to ask for restriction map of sequences
# bigger than 100.000 bp. This is needed to determine the
# space to be reserved for sites location.
#
# MaxSize = 5 => 9.999 bp
# MaxSize = 6 => 99.999 bp
# MaxSize = 7 => 999.999 bp
# example:
#
# <------------ ConsoleWidth --------------->
# <- NameWidth ->
# EcoRI : 1, 45, 50, 300, 400, 650,
# 700, 1200, 2500.
# <-->
# Indent
#
ConsoleWidth = 80
NameWidth = 10
Indent = 4
MaxSize = 6
###############################################################################
# Proxies
#
# Enter here the address of your proxy if any.
# If you don't use proxy use an empty string
# i.e.
# ftp_proxy = ''
# -> no proxy
#
# ftp_proxy = 'http://www.somewhere.something:one_number'
# -> www.somewhere.something is the address of the proxy.
# one_number is the port number.
#
ftp_proxy = ''
###############################################################################
# Rebase ftp location
#
# Do not modify the addresses.
#
ftp_Rebase = 'ftp://ftp.neb.com/'
ftp_emb_e = ftp_Rebase+'pub/rebase/emboss_e.###'
ftp_emb_s = ftp_Rebase+'pub/rebase/emboss_s.###'
ftp_emb_r = ftp_Rebase+'pub/rebase/emboss_r.###'
###############################################################################
# ftp rebase account.
#
# In order to update the rebase files, Rana need to connect to the
# ftp server corresponding.
#
# the general procedure for accessing a ftp server is generally to
# connect as anonymous user (rebase_name) and providing your e-mail address
# as password.
#
# Therefore, you need to enter your e-mail address in rebase_password.
# The address will not be send to anyone but is necessary to login the
# ftp server of rebase when connecting as anonymous user.
#
# Do not forget to enclose the address between "'".
#
Rebase_name = 'anonymous'
Rebase_password = ''
#Rebase_password = 'your_address@somewhere.something'
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