This package is 11.5 MB.
It is available at http://archive.ubuntu.com/ubuntu/pool/universe/b/bedops/bedops_2.4.26+dfsg-1_amd64.deb
.
View its full control file here:
debian/control.
high-performance genomic feature operations
This package depends on:
libbz2-1.0, libc6 (>= 2.14), libgcc1 (>= 1:3.0), libjansson4 (>= 2.3), libstdc++6 (>= 5.2), zlib1g (>= 1:1.1.4), libjs-sphinxdoc, libjs-mathjax, python, tcsh.
This package does not recommend any other package.
This package does not suggest any other package.
This package does not conflict with any other package.
bedops 2.4.26+dfsg-1 is in ubuntu - bionic / universe. This package's architecture is: amd64.
| File | Mime Type | Owner | Mode | Size |
|---|---|---|---|---|
/usr/
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root:root | 0o755 | ||
/usr/bin/
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root:root | 0o755 | ||
/usr/bin/bam2bed
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text/x-shellscript | root:root | 0o755 | 4.1 KB |
/usr/bin/bam2bed_gnuParallel
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text/x-shellscript | root:root | 0o755 | 4.4 KB |
/usr/bin/bam2bed_sge
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text/x-shellscript | root:root | 0o755 | 4.9 KB |
/usr/bin/bam2bed_slurm
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text/x-shellscript | root:root | 0o755 | 4.9 KB |
/usr/bin/bam2starch
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text/x-shellscript | root:root | 0o755 | 5.2 KB |
/usr/bin/bam2starch_gnuParallel
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text/x-shellscript | root:root | 0o755 | 4.4 KB |
/usr/bin/bam2starch_sge
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text/x-shellscript | root:root | 0o755 | 5.0 KB |
/usr/bin/bam2starch_slurm
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text/x-shellscript | root:root | 0o755 | 4.9 KB |
/usr/bin/bedextract
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application/x-sharedlib | root:root | 0o755 | 182.1 KB |
/usr/bin/bedmap
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application/x-sharedlib | root:root | 0o755 | 2.8 MB |
/usr/bin/bedops
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application/x-sharedlib | root:root | 0o755 | 338.1 KB |
/usr/bin/bedops-starch
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application/x-sharedlib | root:root | 0o755 | 82.2 KB |
/usr/bin/closest-features
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application/x-sharedlib | root:root | 0o755 | 198.1 KB |
/usr/bin/convert2bed
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application/x-sharedlib | root:root | 0o755 | 99.2 KB |
/usr/bin/gff2bed
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text/x-shellscript | root:root | 0o755 | 3.7 KB |
/usr/bin/gff2starch
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text/x-shellscript | root:root | 0o755 | 4.8 KB |
/usr/bin/gtf2bed
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text/x-shellscript | root:root | 0o755 | 3.4 KB |
/usr/bin/gtf2starch
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text/x-shellscript | root:root | 0o755 | 4.6 KB |
/usr/bin/gvf2bed
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text/x-shellscript | root:root | 0o755 | 3.7 KB |
/usr/bin/gvf2starch
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text/x-shellscript | root:root | 0o755 | 4.8 KB |
/usr/bin/psl2bed
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text/x-shellscript | root:root | 0o755 | 3.9 KB |
/usr/bin/psl2starch
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text/x-shellscript | root:root | 0o755 | 5.0 KB |
/usr/bin/rmsk2bed
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text/x-shellscript | root:root | 0o755 | 3.7 KB |
/usr/bin/rmsk2starch
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text/x-shellscript | root:root | 0o755 | 4.8 KB |
/usr/bin/sam2bed
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text/x-shellscript | root:root | 0o755 | 4.1 KB |
/usr/bin/sam2starch
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text/x-shellscript | root:root | 0o755 | 5.2 KB |
/usr/bin/sort-bed
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application/x-sharedlib | root:root | 0o755 | 206.1 KB |
/usr/bin/starchcat
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application/x-sharedlib | root:root | 0o755 | 154.2 KB |
/usr/bin/starchcluster_gnuParallel
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text/x-shellscript | root:root | 0o755 | 4.2 KB |
/usr/bin/starchcluster_sge
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text/x-shellscript | root:root | 0o755 | 4.7 KB |
/usr/bin/starchcluster_slurm
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text/x-shellscript | root:root | 0o755 | 4.6 KB |
/usr/bin/starch-diff
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text/x-python | root:root | 0o755 | 9.6 KB |
/usr/bin/starchstrip
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application/x-sharedlib | root:root | 0o755 | 86.1 KB |
/usr/bin/unstarch
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application/x-sharedlib | root:root | 0o755 | 113.9 KB |
/usr/bin/update-sort-bed-migrate-candidates
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text/x-python | root:root | 0o755 | 32.0 KB |
/usr/bin/update-sort-bed-slurm
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text/x-python | root:root | 0o755 | 20.3 KB |
/usr/bin/update-sort-bed-starch-slurm
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text/x-python | root:root | 0o755 | 22.2 KB |
/usr/bin/vcf2bed
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text/x-shellscript | root:root | 0o755 | 4.6 KB |
/usr/bin/vcf2starch
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text/x-shellscript | root:root | 0o755 | 5.7 KB |
/usr/bin/wig2bed
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text/x-shellscript | root:root | 0o755 | 4.5 KB |
/usr/bin/wig2starch
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text/x-shellscript | root:root | 0o755 | 5.6 KB |
/usr/share/
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root:root | 0o755 | ||
/usr/share/doc/
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root:root | 0o755 | ||
/usr/share/doc-base/
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root:root | 0o755 | ||
/usr/share/doc-base/bedops
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text/plain | root:root | 0o644 | 301 bytes |
/usr/share/doc/bedops/
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root:root | 0o755 | ||
/usr/share/doc/bedops/changelog.Debian.gz
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application/gzip | root:root | 0o644 | 305 bytes |
/usr/share/doc/bedops/copyright
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text/plain | root:root | 0o644 | 1.8 KB |
/usr/share/doc/bedops/html/
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root:root | 0o755 | ||
/usr/share/doc/bedops/html/content/
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root:root | 0o755 | ||
/usr/share/doc/bedops/html/content/installation.html
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text/html | root:root | 0o644 | 31.0 KB |
/usr/share/doc/bedops/html/content/overview.html
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text/html | root:root | 0o644 | 12.7 KB |
/usr/share/doc/bedops/html/content/performance.html
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text/html | root:root | 0o644 | 23.3 KB |
/usr/share/doc/bedops/html/content/reference/
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/usr/share/doc/bedops/html/content/reference/file-management/
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text/html | root:root | 0o644 | 12.9 KB |
/usr/share/doc/bedops/html/content/reference/file-management/compression/starchcat.html
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text/html | root:root | 0o644 | 22.8 KB |
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text/html | root:root | 0o644 | 8.1 KB |
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text/html | root:root | 0o644 | 26.1 KB |
/usr/share/doc/bedops/html/content/reference/file-management/compression/starch-specification.html
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text/html | root:root | 0o644 | 25.1 KB |
/usr/share/doc/bedops/html/content/reference/file-management/compression/starchstrip.html
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text/html | root:root | 0o644 | 12.3 KB |
/usr/share/doc/bedops/html/content/reference/file-management/compression/unstarch.html
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text/html | root:root | 0o644 | 48.5 KB |
/usr/share/doc/bedops/html/content/reference/file-management/conversion/
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/usr/share/doc/bedops/html/content/reference/file-management/conversion/bam2bed.html
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text/html | root:root | 0o644 | 18.5 KB |
/usr/share/doc/bedops/html/content/reference/file-management/conversion/convert2bed.html
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text/html | root:root | 0o644 | 10.0 KB |
/usr/share/doc/bedops/html/content/reference/file-management/conversion/gff2bed.html
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text/html | root:root | 0o644 | 17.3 KB |
/usr/share/doc/bedops/html/content/reference/file-management/conversion/gtf2bed.html
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text/html | root:root | 0o644 | 17.7 KB |
/usr/share/doc/bedops/html/content/reference/file-management/conversion/gvf2bed.html
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text/html | root:root | 0o644 | 25.2 KB |
/usr/share/doc/bedops/html/content/reference/file-management/conversion.html
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text/html | root:root | 0o644 | 15.3 KB |
/usr/share/doc/bedops/html/content/reference/file-management/conversion/parallel_bam2bed.html
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text/html | root:root | 0o644 | 9.8 KB |
/usr/share/doc/bedops/html/content/reference/file-management/conversion/parallel_bam2starch.html
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text/html | root:root | 0o644 | 10.6 KB |
/usr/share/doc/bedops/html/content/reference/file-management/conversion/psl2bed.html
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text/html | root:root | 0o644 | 30.4 KB |
/usr/share/doc/bedops/html/content/reference/file-management/conversion/rmsk2bed.html
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text/html | root:root | 0o644 | 22.1 KB |
/usr/share/doc/bedops/html/content/reference/file-management/conversion/sam2bed.html
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text/html | root:root | 0o644 | 24.8 KB |
/usr/share/doc/bedops/html/content/reference/file-management/conversion/vcf2bed.html
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text/html | root:root | 0o644 | 37.4 KB |
/usr/share/doc/bedops/html/content/reference/file-management/conversion/wig2bed.html
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text/html | root:root | 0o644 | 16.5 KB |
/usr/share/doc/bedops/html/content/reference/file-management.html
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text/html | root:root | 0o644 | 25.3 KB |
/usr/share/doc/bedops/html/content/reference/file-management/sorting/
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root:root | 0o755 | ||
/usr/share/doc/bedops/html/content/reference/file-management/sorting.html
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text/html | root:root | 0o644 | 5.8 KB |
/usr/share/doc/bedops/html/content/reference/file-management/sorting/sort-bed.html
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text/html | root:root | 0o644 | 15.5 KB |
/usr/share/doc/bedops/html/content/reference.html
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text/html | root:root | 0o644 | 38.3 KB |
/usr/share/doc/bedops/html/content/reference/set-operations/
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root:root | 0o755 | ||
/usr/share/doc/bedops/html/content/reference/set-operations/bedextract.html
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text/html | root:root | 0o644 | 29.1 KB |
/usr/share/doc/bedops/html/content/reference/set-operations/bedops.html
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text/html | root:root | 0o644 | 73.5 KB |
/usr/share/doc/bedops/html/content/reference/set-operations/closest-features.html
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text/html | root:root | 0o644 | 25.7 KB |
/usr/share/doc/bedops/html/content/reference/set-operations.html
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text/html | root:root | 0o644 | 11.8 KB |
/usr/share/doc/bedops/html/content/reference/set-operations/nested-elements.html
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text/html | root:root | 0o644 | 11.3 KB |
/usr/share/doc/bedops/html/content/reference/statistics/
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/usr/share/doc/bedops/html/content/reference/statistics/bedmap.html
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text/html | root:root | 0o644 | 141.1 KB |
/usr/share/doc/bedops/html/content/reference/statistics.html
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text/html | root:root | 0o644 | 8.4 KB |
/usr/share/doc/bedops/html/content/release.html
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text/html | root:root | 0o644 | 17.7 KB |
/usr/share/doc/bedops/html/content/revision-history.html
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text/html | root:root | 0o644 | 95.8 KB |
/usr/share/doc/bedops/html/content/summary.html
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text/html | root:root | 0o644 | 48.6 KB |
/usr/share/doc/bedops/html/content/usage-examples/
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/usr/share/doc/bedops/html/content/usage-examples/distance-frequencies.html
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text/html | root:root | 0o644 | 11.4 KB |
/usr/share/doc/bedops/html/content/usage-examples.html
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text/html | root:root | 0o644 | 9.6 KB |
/usr/share/doc/bedops/html/content/usage-examples/master-list.html
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text/html | root:root | 0o644 | 10.0 KB |
/usr/share/doc/bedops/html/content/usage-examples/multiple-inputs.html
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text/html | root:root | 0o644 | 11.2 KB |
/usr/share/doc/bedops/html/content/usage-examples/smoothing-tags.html
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text/html | root:root | 0o644 | 8.3 KB |
/usr/share/doc/bedops/html/content/usage-examples/snps-within-dhses.html
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text/html | root:root | 0o644 | 9.9 KB |
/usr/share/doc/bedops/html/content/usage-examples/snp-visualization.html
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text/html | root:root | 0o644 | 22.6 KB |
/usr/share/doc/bedops/html/content/usage-examples/starchcluster.html
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text/html | root:root | 0o644 | 12.9 KB |
/usr/share/doc/bedops/html/_downloads/
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application/gzip | root:root | 0o644 | 7.9 MB |
/usr/share/doc/bedops/html/_downloads/Frequencies-SNPs.bed.starch.gz
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application/gzip | root:root | 0o644 | 155.5 KB |
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application/octet-stream | root:root | 0o644 | 481 bytes |
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application/gzip | root:root | 0o644 | 108.5 KB |
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text/plain | root:root | 0o644 | 454 bytes |
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application/gzip | root:root | 0o644 | 36.2 KB |
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text/x-shellscript | root:root | 0o644 | 1.4 KB |
/usr/share/doc/bedops/html/genindex.html
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text/html | root:root | 0o644 | 3.3 KB |
/usr/share/doc/bedops/html/_images/
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