This package is 221.7 KB.
It is available at http://ftp.debian.org/debian/pool/main/libt/libtfbs-perl/libtfbs-perl_0.7.0+dfsg-4_amd64.deb
.
View its full control file here:
debian/control.
scanning DNA sequence with a position weight matrix
This package depends on:
perl (>= 5.24.1~rc4-1), perlapi-5.24.1, pdl (>= 1:2.017-1), pdlapi-12, libc6 (>= 2.14), bioperl, libwww-perl, libdbi-perl.
This package recommends:
libgd-gd2-perl | libgd-gd2-noxpm-perl.
This package does not suggest any other package.
This package does not conflict with any other package.
libtfbs-perl 0.7.0+dfsg-4 is in debian - stretch / main. This package's architecture is: amd64.
| File | Mime Type | Owner | Mode | Size |
|---|---|---|---|---|
/usr/
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root:root | 0o755 | ||
/usr/lib/
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root:root | 0o755 | ||
/usr/lib/x86_64-linux-gnu/
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root:root | 0o755 | ||
/usr/lib/x86_64-linux-gnu/perl5/
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root:root | 0o755 | ||
/usr/lib/x86_64-linux-gnu/perl5/5.24/
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root:root | 0o755 | ||
/usr/lib/x86_64-linux-gnu/perl5/5.24/auto/
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root:root | 0o755 | ||
/usr/lib/x86_64-linux-gnu/perl5/5.24/auto/TFBS/
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root:root | 0o755 | ||
/usr/lib/x86_64-linux-gnu/perl5/5.24/auto/TFBS/Ext/
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root:root | 0o755 | ||
/usr/lib/x86_64-linux-gnu/perl5/5.24/auto/TFBS/Ext/pwmsearch/
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root:root | 0o755 | ||
/usr/lib/x86_64-linux-gnu/perl5/5.24/auto/TFBS/Ext/pwmsearch/pwmsearch.so
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application/x-sharedlib | root:root | 0o644 | 17.9 KB |
/usr/lib/x86_64-linux-gnu/perl5/5.24/pwm_search.h
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text/x-c | root:root | 0o644 | 4.9 KB |
/usr/lib/x86_64-linux-gnu/perl5/5.24/pwm_searchPFF.c
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text/x-c | root:root | 0o644 | 20.1 KB |
/usr/lib/x86_64-linux-gnu/perl5/5.24/TFBS/
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root:root | 0o755 | ||
/usr/lib/x86_64-linux-gnu/perl5/5.24/TFBS/ConservationProfile.pm
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text/plain | root:root | 0o644 | 4.5 KB |
/usr/lib/x86_64-linux-gnu/perl5/5.24/TFBS/DB/
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root:root | 0o755 | ||
/usr/lib/x86_64-linux-gnu/perl5/5.24/TFBS/DB/FlatFileDir.pm
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text/plain | root:root | 0o644 | 13.5 KB |
/usr/lib/x86_64-linux-gnu/perl5/5.24/TFBS/DB/JASPAR2.pm
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text/plain | root:root | 0o644 | 24.8 KB |
/usr/lib/x86_64-linux-gnu/perl5/5.24/TFBS/DB/JASPAR4.pm
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text/plain | root:root | 0o644 | 21.8 KB |
/usr/lib/x86_64-linux-gnu/perl5/5.24/TFBS/DB/JASPAR5.pm
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text/plain | root:root | 0o644 | 34.1 KB |
/usr/lib/x86_64-linux-gnu/perl5/5.24/TFBS/DB/JASPAR6.pm
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text/plain | root:root | 0o644 | 37.1 KB |
/usr/lib/x86_64-linux-gnu/perl5/5.24/TFBS/DB/JASPAR.pm
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text/plain | root:root | 0o644 | 57.3 KB |
/usr/lib/x86_64-linux-gnu/perl5/5.24/TFBS/DB/LocalTRANSFAC.pm
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text/plain | root:root | 0o644 | 7.5 KB |
/usr/lib/x86_64-linux-gnu/perl5/5.24/TFBS/DB.pm
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text/plain | root:root | 0o644 | 326 bytes |
/usr/lib/x86_64-linux-gnu/perl5/5.24/TFBS/DB/TRANSFAC.pm
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text/plain | root:root | 0o644 | 7.3 KB |
/usr/lib/x86_64-linux-gnu/perl5/5.24/TFBS/Ext/
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root:root | 0o755 | ||
/usr/lib/x86_64-linux-gnu/perl5/5.24/TFBS/Ext/pwmsearch.pm
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text/plain | root:root | 0o644 | 3.7 KB |
/usr/lib/x86_64-linux-gnu/perl5/5.24/TFBS/_Iterator/
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root:root | 0o755 | ||
/usr/lib/x86_64-linux-gnu/perl5/5.24/TFBS/_Iterator/_MatrixSetIterator.pm
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text/plain | root:root | 0o644 | 1.5 KB |
/usr/lib/x86_64-linux-gnu/perl5/5.24/TFBS/_Iterator.pm
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text/plain | root:root | 0o644 | 1.5 KB |
/usr/lib/x86_64-linux-gnu/perl5/5.24/TFBS/_Iterator/_SiteSetIterator.pm
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text/plain | root:root | 0o644 | 1.3 KB |
/usr/lib/x86_64-linux-gnu/perl5/5.24/TFBS/Matrix/
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root:root | 0o755 | ||
/usr/lib/x86_64-linux-gnu/perl5/5.24/TFBS/Matrix/_Alignment.pm
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text/plain | root:root | 0o644 | 11.7 KB |
/usr/lib/x86_64-linux-gnu/perl5/5.24/TFBS/Matrix/Alignment.pm
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text/plain | root:root | 0o644 | 7.1 KB |
/usr/lib/x86_64-linux-gnu/perl5/5.24/TFBS/Matrix/ICM.pm
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text/plain | root:root | 0o644 | 31.7 KB |
/usr/lib/x86_64-linux-gnu/perl5/5.24/TFBS/Matrix/PFM.pm
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text/plain | root:root | 0o644 | 15.7 KB |
/usr/lib/x86_64-linux-gnu/perl5/5.24/TFBS/Matrix.pm
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text/plain | root:root | 0o644 | 10.6 KB |
/usr/lib/x86_64-linux-gnu/perl5/5.24/TFBS/Matrix/PWM.pm
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text/plain | root:root | 0o644 | 15.1 KB |
/usr/lib/x86_64-linux-gnu/perl5/5.24/TFBS/MatrixSet.pm
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text/plain | root:root | 0o644 | 20.4 KB |
/usr/lib/x86_64-linux-gnu/perl5/5.24/TFBS/PatternGen/
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root:root | 0o755 | ||
/usr/lib/x86_64-linux-gnu/perl5/5.24/TFBS/PatternGen/AnnSpec/
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root:root | 0o755 | ||
/usr/lib/x86_64-linux-gnu/perl5/5.24/TFBS/PatternGen/AnnSpec/Motif.pm
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text/plain | root:root | 0o644 | 1.2 KB |
/usr/lib/x86_64-linux-gnu/perl5/5.24/TFBS/PatternGen/AnnSpec.pm
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text/plain | root:root | 0o644 | 6.3 KB |
/usr/lib/x86_64-linux-gnu/perl5/5.24/TFBS/PatternGen/Elph/
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/usr/lib/x86_64-linux-gnu/perl5/5.24/TFBS/PatternGen/Elph/Motif.pm
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/usr/lib/x86_64-linux-gnu/perl5/5.24/TFBS/PatternGen/Elph.pm
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/usr/lib/x86_64-linux-gnu/perl5/5.24/TFBS/PatternGen/Gibbs/
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/usr/lib/x86_64-linux-gnu/perl5/5.24/TFBS/PatternGen/Gibbs/Motif.pm
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/usr/lib/x86_64-linux-gnu/perl5/5.24/TFBS/PatternGen/Gibbs.pm
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text/plain | root:root | 0o644 | 8.1 KB |
/usr/lib/x86_64-linux-gnu/perl5/5.24/TFBS/PatternGenI.pm
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text/plain | root:root | 0o644 | 509 bytes |
/usr/lib/x86_64-linux-gnu/perl5/5.24/TFBS/PatternGen/MEME/
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/usr/lib/x86_64-linux-gnu/perl5/5.24/TFBS/PatternGen/MEME/Motif.pm
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text/plain | root:root | 0o644 | 1.1 KB |
/usr/lib/x86_64-linux-gnu/perl5/5.24/TFBS/PatternGen/MEME.pm
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text/plain | root:root | 0o644 | 6.0 KB |
/usr/lib/x86_64-linux-gnu/perl5/5.24/TFBS/PatternGen/Motif/
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root:root | 0o755 | ||
/usr/lib/x86_64-linux-gnu/perl5/5.24/TFBS/PatternGen/Motif/Matrix.pm
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text/plain | root:root | 0o644 | 1.2 KB |
/usr/lib/x86_64-linux-gnu/perl5/5.24/TFBS/PatternGen/Motif/Word.pm
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text/plain | root:root | 0o644 | 347 bytes |
/usr/lib/x86_64-linux-gnu/perl5/5.24/TFBS/PatternGen.pm
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text/plain | root:root | 0o644 | 4.7 KB |
/usr/lib/x86_64-linux-gnu/perl5/5.24/TFBS/PatternGen/SimplePFM.pm
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text/plain | root:root | 0o644 | 3.2 KB |
/usr/lib/x86_64-linux-gnu/perl5/5.24/TFBS/PatternGen/YMF/
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root:root | 0o755 | ||
/usr/lib/x86_64-linux-gnu/perl5/5.24/TFBS/PatternGen/YMF/Motif.pm
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text/plain | root:root | 0o644 | 1.1 KB |
/usr/lib/x86_64-linux-gnu/perl5/5.24/TFBS/PatternGen/YMF.pm
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text/plain | root:root | 0o644 | 5.2 KB |
/usr/lib/x86_64-linux-gnu/perl5/5.24/TFBS/PatternI.pm
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text/plain | root:root | 0o644 | 3.0 KB |
/usr/lib/x86_64-linux-gnu/perl5/5.24/TFBS/README.md
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text/plain | root:root | 0o644 | 28 bytes |
/usr/lib/x86_64-linux-gnu/perl5/5.24/TFBS/Run/
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root:root | 0o755 | ||
/usr/lib/x86_64-linux-gnu/perl5/5.24/TFBS/Run/ConservationProfileGenerator.pm
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text/plain | root:root | 0o644 | 5.3 KB |
/usr/lib/x86_64-linux-gnu/perl5/5.24/TFBS/SitePair.pm
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text/plain | root:root | 0o644 | 1.6 KB |
/usr/lib/x86_64-linux-gnu/perl5/5.24/TFBS/SitePairSet.pm
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text/plain | root:root | 0o644 | 6.2 KB |
/usr/lib/x86_64-linux-gnu/perl5/5.24/TFBS/Site.pm
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text/plain | root:root | 0o644 | 7.5 KB |
/usr/lib/x86_64-linux-gnu/perl5/5.24/TFBS/SiteSet.pm
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text/plain | root:root | 0o644 | 6.1 KB |
/usr/lib/x86_64-linux-gnu/perl5/5.24/TFBS/TFFM.pm
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text/plain | root:root | 0o644 | 5.2 KB |
/usr/lib/x86_64-linux-gnu/perl5/5.24/TFBS/Tools/
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/usr/lib/x86_64-linux-gnu/perl5/5.24/TFBS/Tools/SetOperations.pm
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text/plain | root:root | 0o644 | 5.8 KB |
/usr/lib/x86_64-linux-gnu/perl5/5.24/TFBS/Word/
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/usr/lib/x86_64-linux-gnu/perl5/5.24/TFBS/Word/Consensus.pm
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text/plain | root:root | 0o644 | 6.5 KB |
/usr/lib/x86_64-linux-gnu/perl5/5.24/TFBS/Word.pm
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text/plain | root:root | 0o644 | 2.2 KB |
/usr/share/
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/usr/share/doc/
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/usr/share/doc/libtfbs-perl/
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/usr/share/doc/libtfbs-perl/changelog.Debian.gz
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application/gzip | root:root | 0o644 | 2.1 KB |
/usr/share/doc/libtfbs-perl/changelog.gz
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application/gzip | root:root | 0o644 | 762 bytes |
/usr/share/doc/libtfbs-perl/copyright
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text/plain | root:root | 0o644 | 1.4 KB |
/usr/share/doc/libtfbs-perl/examples/
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/usr/share/doc/libtfbs-perl/examples/Ext/
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/usr/share/doc/libtfbs-perl/examples/Ext/t/
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/usr/share/doc/libtfbs-perl/examples/Ext/t/pwmsearch.t
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text/plain | root:root | 0o644 | 809 bytes |
/usr/share/doc/libtfbs-perl/examples/Ext/t/test.fa.gz
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application/gzip | root:root | 0o644 | 1.6 KB |
/usr/share/doc/libtfbs-perl/examples/t/
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/usr/share/doc/libtfbs-perl/examples/t/01_Matrix.t
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text/x-perl | root:root | 0o644 | 602 bytes |
/usr/share/doc/libtfbs-perl/examples/t/02_Search.t
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text/x-perl | root:root | 0o644 | 743 bytes |
/usr/share/doc/libtfbs-perl/examples/t/03_DB_FlatFileDir.t
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text/x-perl | root:root | 0o644 | 786 bytes |
/usr/share/doc/libtfbs-perl/examples/t/04_DB_TRANSFAC.t
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text/x-perl | root:root | 0o644 | 553 bytes |
/usr/share/doc/libtfbs-perl/examples/t/05_DB_JASPAR.t
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text/x-perl | root:root | 0o644 | 1.0 KB |
/usr/share/doc/libtfbs-perl/examples/t/06_SimplePFM.t
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text/x-perl | root:root | 0o644 | 588 bytes |
/usr/share/doc/libtfbs-perl/examples/t/07_AnnSpec.t
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text/x-perl | root:root | 0o644 | 1.3 KB |
/usr/share/doc/libtfbs-perl/examples/t/07_Elph.t
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text/x-perl | root:root | 0o644 | 1.1 KB |
/usr/share/doc/libtfbs-perl/examples/t/07_Gibbs.t
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text/x-perl | root:root | 0o644 | 774 bytes |
/usr/share/doc/libtfbs-perl/examples/t/07_MEME.t
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/usr/share/doc/libtfbs-perl/examples/t/08_DB_LocalTRANSFAC.t
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/usr/share/doc/libtfbs-perl/examples/t/09_Word_Consensus.t
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/usr/share/doc/libtfbs-perl/examples/t/10_Tools_SetOperations.t
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/usr/share/doc/libtfbs-perl/examples/t/test.aln.gz
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/usr/share/doc/libtfbs-perl/examples/t/test.gibbin.gz
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/usr/share/doc/libtfbs-perl/examples/t/test_meme.fa.gz
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/usr/share/doc/libtfbs-perl/examples/t/transfac_new/
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/usr/share/doc/libtfbs-perl/examples/t/transfac_new/matrix.dat
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/usr/share/doc/libtfbs-perl/examples/t/transfac_old/
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/usr/share/doc/libtfbs-perl/examples/t/transfac_old/matrix.dat.gz
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/usr/share/doc/libtfbs-perl/README.Debian
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/usr/share/man/
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/usr/share/man/man3/
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/usr/share/man/man3/TFBS::DB::FlatFileDir.3pm.gz
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application/gzip | root:root | 0o644 | 2.9 KB |
/usr/share/man/man3/TFBS::DB::JASPAR2.3pm.gz
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application/gzip | root:root | 0o644 | 5.1 KB |
/usr/share/man/man3/TFBS::DB::JASPAR.3pm.gz
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application/gzip | root:root | 0o644 | 5.2 KB |
/usr/share/man/man3/TFBS::DB::LocalTRANSFAC.3pm.gz
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application/gzip | root:root | 0o644 | 2.2 KB |
/usr/share/man/man3/TFBS::DB::TRANSFAC.3pm.gz
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application/gzip | root:root | 0o644 | 2.3 KB |
/usr/share/man/man3/TFBS::Ext::pwmsearch.3pm.gz
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application/gzip | root:root | 0o644 | 1.3 KB |
/usr/share/man/man3/TFBS::Matrix.3pm.gz
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application/gzip | root:root | 0o644 | 2.1 KB |
/usr/share/man/man3/TFBS::Matrix::Alignment.3pm.gz
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/usr/share/man/man3/TFBS::Matrix::ICM.3pm.gz
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application/gzip | root:root | 0o644 | 3.5 KB |
/usr/share/man/man3/TFBS::Matrix::PFM.3pm.gz
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application/gzip | root:root | 0o644 | 4.2 KB |
/usr/share/man/man3/TFBS::Matrix::PWM.3pm.gz
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application/gzip | root:root | 0o644 | 3.6 KB |
/usr/share/man/man3/TFBS::MatrixSet.3pm.gz
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application/gzip | root:root | 0o644 | 3.5 KB |
/usr/share/man/man3/TFBS::PatternGen.3pm.gz
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application/gzip | root:root | 0o644 | 1.5 KB |
/usr/share/man/man3/TFBS::PatternGen::AnnSpec.3pm.gz
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/usr/share/man/man3/TFBS::PatternGen::AnnSpec::Motif.3pm.gz
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application/gzip | root:root | 0o644 | 1.4 KB |
/usr/share/man/man3/TFBS::PatternGen::Elph.3pm.gz
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application/gzip | root:root | 0o644 | 2.0 KB |
/usr/share/man/man3/TFBS::PatternGen::Elph::Motif.3pm.gz
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application/gzip | root:root | 0o644 | 1.4 KB |
/usr/share/man/man3/TFBS::PatternGen::Gibbs.3pm.gz
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application/gzip | root:root | 0o644 | 2.0 KB |
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application/gzip | root:root | 0o644 | 1.6 KB |
/usr/share/man/man3/TFBS::PatternGen::MEME.3pm.gz
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/usr/share/man/man3/TFBS::PatternGen::MEME::Motif.3pm.gz
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application/gzip | root:root | 0o644 | 1.4 KB |
/usr/share/man/man3/TFBS::PatternGen::SimplePFM.3pm.gz
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application/gzip | root:root | 0o644 | 1.7 KB |
/usr/share/man/man3/TFBS::PatternGen::YMF.3pm.gz
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application/gzip | root:root | 0o644 | 1.9 KB |
/usr/share/man/man3/TFBS::PatternGen::YMF::Motif.3pm.gz
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application/gzip | root:root | 0o644 | 1.4 KB |
/usr/share/man/man3/TFBS::PatternI.3pm.gz
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application/gzip | root:root | 0o644 | 1.8 KB |
/usr/share/man/man3/TFBS::Site.3pm.gz
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/usr/share/man/man3/TFBS::SitePair.3pm.gz
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/usr/share/man/man3/TFBS::SitePairSet.3pm.gz
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/usr/share/man/man3/TFBS::Word.3pm.gz
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/usr/share/man/man3/TFBS::Word::Consensus.3pm.gz
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