/usr/lib/R/site-library/IRanges/INDEX is in r-bioc-iranges 1.22.10-1.
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AtomicList Lists of Atomic Vectors in Natural and Rle Form
DataFrame-class External Data Frame
DataFrameList-class List of DataFrames
DataTable-API The DataTable API
DataTable-stats Statistical modeling with DataTable
FilterMatrix-class Matrix for Filter Results
FilterRules-class Collection of Filter Rules
GappedRanges-class GappedRanges objects
Grouping-class Grouping objects
Hits-class Set of hits between 2 vector-like objects
HitsList-class List of Hits objects
IRanges-class IRanges and NormalIRanges objects
IRanges-constructor The IRanges constructor and supporting
functions
IRanges-utils IRanges utility functions
IRangesList-class List of IRanges and NormalIRanges
IntervalForest-class Interval Search Forests
IntervalTree-class Interval Search Trees
List-class List objects
MaskCollection-class MaskCollection objects
RangedData-class Data on ranges
RangedDataList-class Lists of RangedData
RangedSelection-class Selection of ranges and columns
Ranges-class Ranges objects
Ranges-comparison Comparing and ordering ranges
RangesList-class List of Ranges
RangesMapping-class Mapping of ranges to another sequence
Rle-class Rle objects
RleViews-class The RleViews class
RleViewsList-class List of RleViews
SimpleList-class Simple and Compressed List Classes
Vector-class Vector objects
Vector-comparison Compare, order, tabulate vector-like objects
Views-class Views objects
ViewsList-class List of Views
classNameForDisplay Provide a class name for displaying to users
coverage-methods Coverage of a set of ranges
endoapply Endomorphisms via application of a function
over an object's elements
expand The expand method for uncompressing compressed
data columns
extractList Group elements of a vector-like object into a
list-like object
findOverlaps-methods Finding overlapping ranges
funprog-methods Functional programming methods for List objects
inter-range-methods Inter range transformations of a Ranges, Views,
RangesList, MaskCollection, or RangedData
object
intra-range-methods Intra range transformations of a Ranges, Views,
RangesList, or MaskCollection object
isConstant Test if an atomic vector or array is constant
multisplit Split elements belonging to multiple groups
nearest-methods Finding the nearest range neighbor
rdapply Applying over spaces
read.Mask Read a mask from a file
reverse reverse
runstat Fixed width running window summaries across
vector-like objects
score Score accessor and setter
seqapply Apply function and cast to Vector
setops-methods Set operations on IRanges, RangesList, and Hits
objects
slice-methods Slice a vector-like or list-like object
unstrsplit Some utility functions to operate on strings
updateObject-methods Update an object of a class defined in the
IRanges package to its current class definition
view-summarization-methods
Summarize views on a vector-like object with
numeric values
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